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Hidden Markov Models for Time Series - Walter Zucchini, Iain L. MacDonald

Hidden Markov Models for Time Series

An Introduction Using R
Buch | Hardcover
288 Seiten
2009
Chapman & Hall/CRC (Verlag)
978-1-58488-573-3 (ISBN)
CHF 116,95 inkl. MwSt
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Illustrates the flexibility of HMMs as general-purpose models for time series data. This work presents an overview of HMMs for analyzing time series data, from continuous-valued, circular, and multivariate series to binary data, bounded and unbounded counts and categorical observations.
Reveals How HMMs Can Be Used as General-Purpose Time Series Models


Implements all methods in R
Hidden Markov Models for Time Series: An Introduction Using R applies hidden Markov models (HMMs) to a wide range of time series types, from continuous-valued, circular, and multivariate series to binary data, bounded and unbounded counts, and categorical observations. It also discusses how to employ the freely available computing environment R to carry out computations for parameter estimation, model selection and checking, decoding, and forecasting.


Illustrates the methodology in action
After presenting the simple Poisson HMM, the book covers estimation, forecasting, decoding, prediction, model selection, and Bayesian inference. Through examples and applications, the authors describe how to extend and generalize the basic model so it can be applied in a rich variety of situations. They also provide R code for some of the examples, enabling the use of the codes in similar applications.


Effectively interpret data using HMMs
This book illustrates the wonderful flexibility of HMMs as general-purpose models for time series data. It provides a broad understanding of the models and their uses.

University of Gottingen, Germany University of Cape Town, South Africa University College, London, UK Stanford University, California, USA Johns Hopkins Bloomberg School of Public Health, MD, USA London School of Economics, UK London School of Economics, UK University of Copenhagen, Denmark

MODEL STRUCTURE, PROPERTIES, AND METHODS


Mixture Distributions and Markov Chains


Introduction


Independent mixture models


Markov chains


Hidden Markov Models: Definition and Properties


A simple hidden Markov model


The basics


The likelihood





Estimation by Direct Maximization of the Likelihood


Introduction


Scaling the likelihood computation


Maximization subject to constraints


Other problems


Example: earthquakes


Standard errors and confidence intervals


Example: parametric bootstrap





Estimation by the EM Algorithm


Forward and backward probabilities


The EM algorithm


Examples of EM applied to Poisson HMMs


Discussion





Forecasting, Decoding, and State Prediction


Conditional distributions


Forecast distributions


Decoding


State prediction





Model Selection and Checking


Model selection by AIC and BIC


Model checking with pseudo-residuals


Examples


Discussion





Bayesian Inference for Poisson HMMs


Applying the Gibbs sampler to Poisson HMMs


Bayesian estimation of the number of states


Example: earthquakes


Discussion





Extensions of the Basic Hidden Markov Model


Introduction


HMMs with general univariate state-dependent distribution


HMMs based on a second-order Markov chain


HMMs for multivariate series


Series which depend on covariates


Models with additional dependencies





APPLICATIONS


Epileptic Seizures


Introduction


Models fitted


Model checking by pseudo-residuals


Eruptions of the Old Faithful Geyser


Introduction


Binary time series of short and long eruptions


Normal HMMs for durations and waiting times


Bivariate model for durations and waiting times





Drosophila Speed and Change of Direction


Introduction


Von Mises distributions


Von Mises HMMs for the two subjects


Circular autocorrelation functions


Bivariate model





Wind Direction at Koeberg


Introduction


Wind direction as classified into 16 categories


Wind direction as a circular variable





Models for Financial Series


Thinly traded shares


Multivariate HMM for returns on four shares


Stochastic volatility models





Births at Edendale Hospital


Introduction


Models for the proportion Caesarean


Models for the total number of deliveries


Conclusion





Cape Town Homicides and Suicides


Introduction


Firearm homicides as a proportion of all homicides, suicides, and legal intervention homicides


The number of firearm homicides


Firearm homicide and suicide proportions


Proportion in each of the five categories





Animal-Behavior Model with Feedback


Introduction


The model


Likelihood evaluation


Parameter estimation by maximum likelihood


Model checking


Inferring the underlying state


Models for a heterogeneous group of subjects


Other modifications or extensions


Application to caterpillar feeding behavior


Discussion


Appendix A: Examples of R code


Stationary Poisson HMM, numerical maximization


More on Poisson HMMs, including EM


Bivariate normal state-dependent distributions


Categorical HMM, constrained optimization





Appendix B: Some Proofs


Factorization needed for forward probabilities


Two results for backward probabilities


Conditional independence of Xt1 and XTt+1





References


Author Index


Subject Index


Exercises appear at the end of most chapters.

Erscheint lt. Verlag 30.4.2009
Reihe/Serie Chapman & Hall/CRC Monographs on Statistics & Applied Probability
Zusatzinfo 400; 63 Tables, black and white; 64 Illustrations, black and white
Sprache englisch
Maße 152 x 229 mm
Gewicht 544 g
Themenwelt Mathematik / Informatik Mathematik
Naturwissenschaften Biologie
Wirtschaft Volkswirtschaftslehre Ökonometrie
ISBN-10 1-58488-573-4 / 1584885734
ISBN-13 978-1-58488-573-3 / 9781584885733
Zustand Neuware
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